Reaction #1909805

ord-93f60bc4618a4890a4f09cf6666fa213

Reaction equation

O=[N+]([O-])c1ccc(F)c([N+](=O)[O-])c1
DNFB
O=[N+]([O-])c1ccc(F)c([N+](=O)[O-])c1
2,4-Dinitrofluorobenzene
CCCCCCNO[C@@H]1[C@H](O)[C@@H](COC(c2ccccc2)(c2ccccc2)c2cccc(OC)c2OC)O[C@H]1n1ccc(=O)[nH]c1=O
5′-O-(dimethoxytrityl)-2′-O-(hexylamino)uridine
O=[N+]([O-])c1ccc(F)c([N+](=O)[O-])c1
DNFB
CCCCCCN(O[C@@H]1[C@H](O)[C@@H](COC(c2ccccc2)(c2ccccc2)c2cccc(OC)c2OC)O[C@H]1n1ccc(=O)[nH]c1=O)c1ccc([N+](=O)[O-])cc1[N+](=O)[O-]
5′-O-(dimethoxytrityl)-2′-O-[hexyl-N-(2,4-dinitrophenyl)amino]uridine

Solvents

Conditions

Detailed conditions
See reaction.notes.procedure_details.

Workup

  1. 1
    workup.STIRRINGthe reaction mixture shaken an additional 30 min
  2. 2
    workup.STIRRINGAfter shaking 2.5 hours
  3. 3
    Concentrationthe mixture was concentrated in vacuo
  4. 4
    Otherchromatographed on a silica gel column
  5. 5
    Washeluting with a gradient of 25% ethyl acetate in hexanes to 100% ethyl acetate
  6. 6
    WashThe desired product (0.51 grams, 46%) eluted with 100% ethyl acetate (Rf 0.85 by TLC)

Procedure

5′-O-(dimethoxytrityl)-2′-O-(hexylamino)uridine (0.88 grams, 1.37 mmol) was dissolved in methanol (20 mL). 2,4-Dinitrofluorobenzene (DNFB, 0.25 grams, 1.37 mmol) was added and the mixture shaken on a mechanical shaker. The reaction was monitored by TLC. After 90 min, another 0.25 grams of DNFB was added and the reaction mixture shaken an additional 30 min, followed by addition of another 0.25 grams of DNFB. After shaking 2.5 hours, the mixture was concentrated in vacuo and chromatographed on a silica gel column, eluting with a gradient of 25% ethyl acetate in hexanes to 100% ethyl acetate. The desired product (0.51 grams, 46%) eluted with 100% ethyl acetate (Rf 0.85 by TLC).

Source

DOI: 10.6084/m9.figshare.5104873.v1Patent: US07037646B1uspto-grants-2006_05