Reaction #155386

ord-a5df0061179646d2b98d14a818ae7124

Reaction equation

Cl.NC(CO)(CO)CO
Tris-HCl
CC(C)(COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O)[C@@H](O)C(=O)NCCC(=O)NCCS
CoA
COc1cc(/C=C/C(=O)O)cc(OC)c1O
sinapinic acid
C/C=C/C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O
crotonyl-CoA

Reagents

None

Conditions

Detailed conditions
See reaction.notes.procedure_details.

Workup

  1. 1
    Extractionfree extract
  2. 2
    Otherto proceed at room temperature
  3. 3
    workup.ADDITIONby adding 1 volume 10% trifluoroacetic acid (TFA)
  4. 4
    OtherThe reaction mixtures
  5. 5
    Otherwere purified
  6. 6
    WashThe column was washed twice with 1 mL 0.1% TFA
  7. 7
    WashThe sample was eluted in 200 μL 40% acetonitrile
  8. 8
    OtherThe acetonitrile was removed by centrifugation in vacuo
  9. 9
    OtherSamples were prepared for MALDI-TOF MS analysis
  10. 10
    Otherto air dry

Procedure

The assay mixture contained 50 mM Tris-HCl (pH 7.5), 1 mM CoA ester, and about 1 μg cell free extract. Reactions were allowed to proceed at room temperature and were stopped by adding 1 volume 10% trifluoroacetic acid (TFA). The reaction mixtures were purified prior to MALDI-TOF MS analysis using Sep Pak Vac C18 50 mg columns (Waters, Inc.). The columns were conditioned with 1 mL methanol and then equilibrated with two washes of 1 mL 0.1% TFA. The sample was applied to the column, and the flow through was discarded. The column was washed twice with 1 mL 0.1% TFA. The sample was eluted in 200 μL 40% acetonitrile, 0.1% TFA. The acetonitrile was removed by centrifugation in vacuo. Samples were prepared for MALDI-TOF MS analysis by mixing 1:1 with 110 mM sinapinic acid in 0.1% TFA, 67% acetonitrile. The samples were allowed to air dry.

Source

DOI: 10.6084/m9.figshare.5104873.v1Patent: US08822197B2uspto-grants-2014_09