Reaktion #52122

ord-4d2b52a522c84c9fba7535f0c6fde093

Reaktionsgleichung

CC(C)(COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@H](O)CCc1ccccc1
(R)-3-hydroxy-5-phenylvaleryl CoA
CC(C)(COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@H](O)CCc1ccc(F)cc1
(R)-3-hydroxy-5-(4-fluorophenyl) valeryl CoA
CC(C)(COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@H](O)CCC[C@H]1CO1
(R,S)-3-hydroxy-7,8-epoxyoctanoyl CoA
O=C(O)c1cccc(Cl)c1
3-chlorobenzoic acid
O=C(O)C[C@H](O)CCC[C@H]1CO1
(R,S)-3-hydroxy-7,8-epoxyoctanoic acid
CC(C)(COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@H](O)CCC[C@H]1CO1
(R,S)-3-hydroxy-7,8-epoxyoctanoyl CoA
Nc1ncnc2c1ncn2[C@@H]1O[C@H](COP(=O)(O)OP(=O)(O)OP(=O)(O)O)[C@@H](O)[C@H]1O
ATP
[Cl-].[Cl-].[Mg+2]
MgCl2
CC(C)(COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O)[C@@H](O)C(=O)NCCC(=O)NCCS
coenzyme A
CCCCC[C@@H](O)CC(=O)[O-]
(R)-3-hydroxyoctanoate
O=S(=O)(O)O
Sulfuric acid
C=CCCCC(O)CC(=O)O
3-hydroxy-7-octenoic acid
CCCCC[C@@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1OP(=O)(O)O
(R)-3-hydroxyoctanoyl-CoA

Lösungsmittel

Reaktionsbedingungen

Detaillierte Bedingungen
See reaction.notes.procedure_details.

Aufarbeitung

  1. 1
    Einengenso that the concentration
  2. 2
    Sonstigewas stored in a hot bat at 37° C.
  3. 3
    workup.ALIQUOTwas sampled at appropriate times
  4. 4
    Sonstigethe progress of the reaction by HPLC
  5. 5
    Sonstigethe enzyme reaction
  6. 6
    Extraktion(R)-3-hydroxyoctanoate being an unreacted substrate was extracted with n-heptane
  7. 7
    Sonstigeremoved
  8. 8
    Waschena RP18 column (nucleosil C18, 7 μm, Knauser), elution
  9. 9
    Einengenwas conducted with the linear concentration gradient of acetonitrile using a 25 mM phosphate buffer solution (pH 5.3)
  10. 10
    Sonstigeas a mobile phase, and absorption spectra of 200 to 500 nm
  11. 11
    Sonstigeproduced through the enzyme reaction
  12. 12
    Sonstigewas prepared
  13. 13
    Sonstigesynthesized by the method

Vorschrift

(R)-3-hydroxyoctanoyl-CoA was synthesized in accordance with the following procedure, based on the method of Rehm BHA, Kruger N, Steinbuchel A (1998) Journal of Biological Chemistry 273 pp 24044-24051, with the method slightly modified. Acyl-CoA synthetase (manufactured by Sigma Co., Ltd.) was dissolved in a tris hydrochloric buffer solution (50 mM, pH 7.5) containing 2 mM ATP, 5 mM MgCl2, 2 mM coenzyme A and 2 mM (R)-3-hydroxyoctanoate so that the concentration was 0.1 milliunit per microliter. The solution was stored in a hot bat at 37° C., and was sampled at appropriate times to analyze the progress of the reaction by HPLC. Sulfuric acid was added in the sampled reaction solution to make a concentration 0.02 N to stop the enzyme reaction, and thereafter (R)-3-hydroxyoctanoate being an unreacted substrate was extracted with n-heptane and removed. For the analysis by HPLC, using a RP18 column (nucleosil C18, 7 μm, Knauser), elution was conducted with the linear concentration gradient of acetonitrile using a 25 mM phosphate buffer solution (pH 5.3) as a mobile phase, and absorption spectra of 200 to 500 nm were monitored by a diode array detector, thereby detecting a thioester compound produced through the enzyme reaction. In a similar way, (R)-3-hydroxy-5-phenylvaleryl CoA, (R)-3-hydroxy-5-(4-fluorophenyl) valeryl CoA, (R,S)-3-hydroxy-5-phenoxyvaleryl CoA and (R,S)-3-hydroxy-7,8-epoxyoctanoyl CoA were prepared. Furthermore, (R,S)-3-hydroxy-7,8-epoxyoctanoic acid for use in preparation of (R,S)-3-hydroxy-7,8-epoxyoctanoyl CoA was prepared by epoxidizing unsaturated parts of 3-hydroxy-7-octenoic acid synthesized by the method described in Int. J. Biol. Macromol., 12, 85-91 (1990) with 3-chlorobenzoic acid.

Quelle

DOI: 10.6084/m9.figshare.5104873.v1Patent: US06853477B2uspto-grants-2005_02